HL7 Europe Laboratory Report
0.1.0 - trial-use 150

This page is part of the HL7 Europe Laboratory Report (v0.1.0: STU 1) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: A.4 - Specimen information model to this guide - JSON Representation

Page standards status: Informative Maturity Level: 2

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{
  "resourceType" : "ConceptMap",
  "id" : "specimen2FHIR-eu-lab",
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>Mapping from <a href=\"StructureDefinition-SpecimenLab.html\">A.4 - Specimen information</a> to <a href=\"StructureDefinition-Specimen-eu-lab.html\">Specimen: Laboratory</a></p><p>DRAFT (not intended for production usage). Published on 2024-02-26 08:16:21+0100 by HL7 Europe (HL7 Europe: <a href=\"http://hl7.eu\">http://hl7.eu</a>). Used by permission of HL7 Europe, all rights reserved Creative Commons License</p><div><p>eHN Specimen Model to this guide Map</p>\n</div><br/><p><b>Group 1</b>Mapping from <a href=\"StructureDefinition-SpecimenLab.html\">A.4 - Specimen information</a> to <a href=\"StructureDefinition-Specimen-eu-lab.html\">Specimen: Laboratory</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td><td><b>Comment</b></td></tr><tr><td>SpecimenLab.identifier (A.4.1 Specimen identifier)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.identifier</td><td/></tr><tr><td>SpecimenLab.speciesType (A.4.2 Type of species)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.subject.extension:patient-animal.extension:species</td><td>subject.ofType(Patient)</td></tr><tr><td>SpecimenLab.material (A.4.3 Material)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.type</td><td/></tr><tr><td>SpecimenLab.collected (A.4.4 Collection period)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.collection.collected[x]</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.collection.bodySite</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.collection.extension:bodySite</td><td>see Group 2 for details</td></tr><tr><td>SpecimenLab.morphology (A.4.6 Morphology)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.collection.extension:bodySite</td><td>see Group 2 for details</td></tr><tr><td>SpecimenLab.sourceDevice (A.4.7 Source Device)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.subject</td><td>When the device (e.g. the catheter) is what has been examinated.\r\nIf the device is meant instead as the mean used to collect the specimen (e.g blood collected from the catheter), then, this is represented by the collectionMethod attribute and mapped into the Specimen.collection.method</td></tr><tr><td>SpecimenLab.collectionMethod (A.4.8 Collection procedure/method)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.collection.method</td><td/></tr><tr><td>SpecimenLab.receivedDateTime (A.4.9 Received date)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>Specimen.receivedTime</td><td/></tr></table><hr/><p><b>Group 2</b>Mapping from <a href=\"StructureDefinition-SpecimenLab.html\">A.4 - Specimen information</a> to <a href=\"StructureDefinition-BodyStructure-eu-lab.html\">Body structure: Laboratory</a></p><table class=\"grid\"><tr><td><b>Source Code</b></td><td><b>Relationship</b></td><td><b>Target Code</b></td><td><b>Comment</b></td></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>BodyStructure.location</td><td/></tr><tr><td>SpecimenLab.anatomicLocation (A.4.5 Anatomic location)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>BodyStructure.extension:laterality</td><td>For details about laterality</td></tr><tr><td>SpecimenLab.morphology (A.4.6 Morphology)</td><td><a href=\"http://hl7.org/fhir/R4/codesystem-concept-map-equivalence.html#null\"/></td><td>BodyStructure.morphology</td><td/></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger" : 2
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode" : "informative"
    }
  ],
  "url" : "http://hl7.eu/fhir/laboratory/ConceptMap/specimen2FHIR-eu-lab",
  "version" : "0.1.0",
  "name" : "Specimen2Fhir",
  "title" : "eHN Specimen to this guide Map",
  "status" : "draft",
  "experimental" : true,
  "date" : "2024-02-26T08:16:21+01:00",
  "publisher" : "HL7 Europe",
  "contact" : [
    {
      "name" : "HL7 Europe",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://hl7.eu"
        }
      ]
    }
  ],
  "description" : "eHN Specimen Model to this guide Map",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "150",
          "display" : "Europe"
        }
      ]
    }
  ],
  "purpose" : "It shows how the Specimen data set defined by the EU eHN guidelines is mapped into this guide",
  "copyright" : "Used by permission of HL7 Europe, all rights reserved Creative Commons License",
  "sourceUri" : "http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab",
  "targetUri" : "http://hl7.eu/fhir/laboratory/StructureDefinition/Specimen-eu-lab",
  "group" : [
    {
      "source" : "http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab",
      "target" : "http://hl7.eu/fhir/laboratory/StructureDefinition/Specimen-eu-lab",
      "element" : [
        {
          "code" : "SpecimenLab.identifier",
          "display" : "A.4.1 Specimen identifier",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "Specimen.identifier",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "SpecimenLab.speciesType",
          "display" : "A.4.2 Type of species",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "relatedto"
                }
              ],
              "code" : "Specimen.subject.extension:patient-animal.extension:species",
              "equivalence" : "relatedto",
              "comment" : "subject.ofType(Patient)"
            }
          ]
        },
        {
          "code" : "SpecimenLab.material",
          "display" : "A.4.3 Material",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "Specimen.type",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "SpecimenLab.collected",
          "display" : "A.4.4 Collection period",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "Specimen.collection.collected[x]",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "SpecimenLab.anatomicLocation",
          "display" : "A.4.5 Anatomic location",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "relatedto"
                }
              ],
              "code" : "Specimen.collection.bodySite",
              "equivalence" : "relatedto"
            }
          ]
        },
        {
          "code" : "SpecimenLab.anatomicLocation",
          "display" : "A.4.5 Anatomic location",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "relatedto"
                }
              ],
              "code" : "Specimen.collection.extension:bodySite",
              "equivalence" : "relatedto",
              "comment" : "see Group 2 for details"
            }
          ]
        },
        {
          "code" : "SpecimenLab.morphology",
          "display" : "A.4.6 Morphology",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "relatedto"
                }
              ],
              "code" : "Specimen.collection.extension:bodySite",
              "equivalence" : "relatedto",
              "comment" : "see Group 2 for details"
            }
          ]
        },
        {
          "code" : "SpecimenLab.sourceDevice",
          "display" : "A.4.7 Source Device",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "relatedto"
                }
              ],
              "code" : "Specimen.subject",
              "equivalence" : "relatedto",
              "comment" : "When the device (e.g. the catheter) is what has been examinated.\r\nIf the device is meant instead as the mean used to collect the specimen (e.g blood collected from the catheter), then, this is represented by the collectionMethod attribute and mapped into the Specimen.collection.method"
            }
          ]
        },
        {
          "code" : "SpecimenLab.collectionMethod",
          "display" : "A.4.8 Collection procedure/method",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "Specimen.collection.method",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "SpecimenLab.receivedDateTime",
          "display" : "A.4.9 Received date",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "Specimen.receivedTime",
              "equivalence" : "equivalent"
            }
          ]
        }
      ]
    },
    {
      "source" : "http://hl7.eu/fhir/laboratory/StructureDefinition/SpecimenLab",
      "target" : "http://hl7.eu/fhir/laboratory/StructureDefinition/BodyStructure-eu-lab",
      "element" : [
        {
          "code" : "SpecimenLab.anatomicLocation",
          "display" : "A.4.5 Anatomic location",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "BodyStructure.location",
              "equivalence" : "equivalent"
            }
          ]
        },
        {
          "code" : "SpecimenLab.anatomicLocation",
          "display" : "A.4.5 Anatomic location",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "BodyStructure.extension:laterality",
              "equivalence" : "equivalent",
              "comment" : "For details about laterality"
            }
          ]
        },
        {
          "code" : "SpecimenLab.morphology",
          "display" : "A.4.6 Morphology",
          "target" : [
            {
              "modifierExtension" : [
                {
                  "url" : "http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence",
                  "valueCode" : "equivalent"
                }
              ],
              "code" : "BodyStructure.morphology",
              "equivalence" : "equivalent"
            }
          ]
        }
      ]
    }
  ]
}